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Bioinformatics
What is the difference between blastn and tblastn?
Bioinformatics
Why E-value is dependent on the database and query size?
Bioinformatics
Why BLAST hits with higher scores tend to have lower E-value?
Bioinformatics
If you want to find more distant homologs in BLAST search, what scoring matrix would you use?
Bioinformatics
Briefly describe SCOP’s protein classification scheme.
Bioinformatics
Briefly describe SCOP’s protein classification scheme.
Bioinformatics
Is GO database a sequence database? Why?
Bioinformatics
What are the two member databases of UniProtKB? How are they different?
Bioinformatics
What are the major protein sequence databases?
Bioinformatics
If you see an NCBI accession numbers start with NM_, what does it mean? What about XP_, NC_, NW_, NZ_?
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