Assume that two individuals with the same mutation in the BRCA1 gene, two of them are heterozygous and the effect of the mutation is dominant. Heterozygous mutations in the BRCA1 gene have been associated with breast cancer development. However one of the individual developped breast cancer but the othe inidividual survided very healthy life untill she died. How would you explain this situation that expected phenotype is not observed from the given genotype?
A 21 year old women consult her physician because she is concerned about devoloping adult polycystic kidney disease (APKD). She has always been healthy and has never had any problems with her kidneys or urine. Also, her sister is healty. However, her father just developped renal failure, and her aunt and grand mother had renal transplants in their 40s. The women’s father, aunt, and grandmother have been diagnosed as having APKD. The patients’s 28 years old cousin (her aunt daughter) also has been found to have this condition, but she is healthy.
Gene flow between two distantly-located populations will cause the traits & genes of individuals in the two populations to ___________ over time.
In a pea plant that breeds true for tall, what possible gametes will be produced
GENE F
DNA: TAG TAG TCT
mRNA:
tRNA:
AMINO ACID SEQUENCE:
TRAIT:
GENE G
DNA: CCA TCC TTT GGG
mRNA:
tRNA:
AMINO ACID SEQUENCE:
TRAIT:
GENE H
DNA: CCA CAT AAT
mRNA:
tRNA:
AMINO ACID SEQUENCE:
TRAIT:
Calculate if your data differ significantly from the null hypothesis that neither individual is favoured, i.e. counts should be close to 50:50.
• Use χ2 tests; degrees of freedom are the (number of classes – 1) = 1. The critical values for 2 χ1 = 3.841459 for P = 0.05, 2 χ1 = 6.634897 for P = 0.01, and 2 χ1 = 10.82757 for P = 0.001. Remember to use counts, not percentages in the test.
• For multiple tests (say n) one should adjust the p-value where you are happy to reject the null hypothesis to (p-vale)/n.
• Remember that χ2 is the sum of at least two values.
• In each case state your P-value and exactly what the P-value you obtain means in terms of the null hypothesis. If the probability is smaller than 0.05 and also smaller than 0.01, then we say p < 0.01 as this indicates a stronger rejection of the null hypothesis.
When expressed, a new allele causes its carrier to give a recipient 0.4 units of benefit at a cost of 0.3 units. Calculate if this allele will increase in frequency if:
a) It is autosomal and both parents are recipients (unless stated otherwise, you can assume it is not imprinted).
b) It is in a haplodiploid species, the actor is a female and the recipient is her brother.
c) It is on the mitochondrial genome, expressed in males and sisters are recipients.
Calculate the relatedness of a boy-child to a) his biological mother, b) stepfather, and c) full sister for i) a regular autosomal locus, and ii) for if he was a haplodiploid. Drawing the mother etc.’s genotypes and the gametes, indicate identity and non-identity with different colour lines, count ibd fractions and take a ratio to obtain the relatedness. Where the kin-value is important, calculate that too (20)
A group of researchers studying turtles have isolated an autosomal mutation that confers ninja-like –reflexes just prior to adulthood. This mutation is recessive to the normal slow allele (S). when homozygous slow turtle is mated to a homozygous mutant ninja turtle and the F1 are interbred, the following phenotypes are observed among the F2 young adult: 25 slow, 15 ninjas. Answer the following:
1. What are the phenotype of the parental generation?
2. What are the phenotype of the F1 generation?
3. Perform the Chi-square analysis.